dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01555
Location and strand information: 234549 - 236075 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.6118
Protein molecular weight: 57682.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01556
Location and strand information: 236094 - 237491 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01557
Location and strand information: 237597 - 240767 (-)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9313
Protein molecular weight: 121675.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01558
Location and strand information: 240780 - 241622 (-)
Family: 3.A.1.1.17
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01559
Location and strand information: 241619 - 242515 (-)
Family: 3.A.1.1.7
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01560
Location and strand information: 242672 - 243928 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01561
Location and strand information: 243906 - 245732 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01562
Location and strand information: 245756 - 246448 (-)
Family: GntR
Protein type: TF
Protein description: HTH-type transcriptional repressor RspR

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01563
Location and strand information: 246736 - 247755 (+)
Family: null
Protein type: null
Protein description: putative zinc-type alcohol dehydrogenase-like protein YjmD

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01564
Location and strand information: 247829 - 254725 (-)
Family: GH30|CBM13|GH43_22|GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2704
Protein molecular weight: 252907.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01565
Location and strand information: 254833 - 262071 (-)
Family: GH59
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.2612
Protein molecular weight: 265508.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01566
Location and strand information: 262177 - 262278 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01567
Location and strand information: 262531 - 263694 (-)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated glucuronyl hydrolase
Protein isoelectric point: 5.2911
Protein molecular weight: 44071.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01568
Location and strand information: 263712 - 265514 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01569
Location and strand information: 265487 - 267079 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01570
Location and strand information: 267093 - 268682 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01571
Location and strand information: 268703 - 269575 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01572
Location and strand information: 269589 - 270530 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01573
Location and strand information: 270890 - 273106 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000150_5|CGC4
Gene ID: MGYG000000150_01574
Location and strand information: 273170 - 275200 (-)
Family: 9.A.8.1.5
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000150_01555	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	234549	236075	-	GH51
MGYG000000150_01556	hypothetical protein	STP	236094	237491	-	SBP_bac_1
MGYG000000150_01557	hypothetical protein	CAZyme	237597	240767	-	GH38
MGYG000000150_01558	Inner membrane ABC transporter permease protein YcjP	TC	240780	241622	-	3.A.1.1.17
MGYG000000150_01559	L-arabinose transport system permease protein AraP	TC	241619	242515	-	3.A.1.1.7
MGYG000000150_01560	Regulator of RpoS	TF	242672	243928	-	HTH_AraC+HTH_AraC
MGYG000000150_01561	hypothetical protein	TC	243906	245732	-	8.A.59.2.1
MGYG000000150_01562	HTH-type transcriptional repressor RspR	TF	245756	246448	-	GntR
MGYG000000150_01563	putative zinc-type alcohol dehydrogenase-like protein YjmD	null	246736	247755	+	ADH_N\| ADH_zinc_N
MGYG000000150_01564	hypothetical protein	CAZyme	247829	254725	-	GH30\| CBM13\| GH43_22\| GH43_24\| GH43
MGYG000000150_01565	hypothetical protein	CAZyme	254833	262071	-	GH59
MGYG000000150_01566	hypothetical protein	null	262177	262278	-	No domain
MGYG000000150_01567	Unsaturated glucuronyl hydrolase	CAZyme	262531	263694	-	GH88
MGYG000000150_01568	hypothetical protein	null	263712	265514	-	No domain
MGYG000000150_01569	hypothetical protein	null	265487	267079	-	No domain
MGYG000000150_01570	hypothetical protein	TC	267093	268682	-	3.A.1.1.10
MGYG000000150_01571	L-arabinose transport system permease protein AraQ	TC	268703	269575	-	3.A.1.1.10
MGYG000000150_01572	putative multiple-sugar transport system permease YteP	TC	269589	270530	-	3.A.1.1.10
MGYG000000150_01573	HTH-type transcriptional activator RhaR	TF	270890	273106	+	HTH_AraC
MGYG000000150_01574	hypothetical protein	TC	273170	275200	-	9.A.8.1.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature